PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G113300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 269aa    MW: 29245.6 Da    PI: 5.2241
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G113300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-3076135260
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                         +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY  eHnh+k
  Prupe.3G113300.1.p  76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLLITYACEHNHPK 135
                         69*************************998****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-3168136IPR003657WRKY domain
SuperFamilySSF1182901.44E-2573136IPR003657WRKY domain
SMARTSM007741.0E-3575135IPR003657WRKY domain
PROSITE profilePS5081131.74376136IPR003657WRKY domain
PfamPF031062.0E-2577134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MDPKFYRISP FGTDPADPDQ PMTSENGPGS PSSGEETKVA TAPSPKKRRG VQKRVVTVPI  60
GDVEGSKSKG EGHPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP  120
TMLLITYACE HNHPKPTTKP HQTSTAMSPN AEPELPAKTI TPNDEELTIF ASQVDLDLSD  180
DSATLLSAFG WFSDVASTAV LESPICAGNS SCADYDVATR LGDEEDEYLF ADLGELPEGS  240
VIFRHKMVES DEQKRRCSLS VVPCCDSR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-18761361574WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008228947.10.0PREDICTED: probable WRKY transcription factor 69
SwissprotQ93WV54e-79WRK69_ARATH; Probable WRKY transcription factor 69
TrEMBLM5X8S60.0M5X8S6_PRUPE; Uncharacterized protein
STRINGGLYMA12G33990.14e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27703475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.29e-73WRKY DNA-binding protein 69